Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SIX5Q8N196 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
SIX5Q8N196 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SIX5Q8N196 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX5Q8N196 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX5Q8N196 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.26■□□□□ 0.35
SIX5Q8N196 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.26■□□□□ 0.35
SIX5Q8N196 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.26■□□□□ 0.35
SIX5Q8N196 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX5Q8N196 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SIX5Q8N196 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SIX5Q8N196 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SIX5Q8N196 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.25■□□□□ 0.35
SIX5Q8N196 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.25■□□□□ 0.35
SIX5Q8N196 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.25■□□□□ 0.35
SIX5Q8N196 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SIX5Q8N196 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.25■□□□□ 0.35
SIX5Q8N196 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 SPDYE12P-201ENST00000618416 771 ntBASIC17.25■□□□□ 0.35
SIX5Q8N196 MIR6799-201ENST00000620297 69 ntBASIC17.25■□□□□ 0.35
SIX5Q8N196 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX5Q8N196 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.25■□□□□ 0.35
SIX5Q8N196 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX5Q8N196 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX5Q8N196 CROCCP3-202ENST00000420820 1947 ntBASIC17.24■□□□□ 0.35
SIX5Q8N196 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX5Q8N196 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.24■□□□□ 0.35
SIX5Q8N196 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.24■□□□□ 0.35
SIX5Q8N196 HILS1-202ENST00000545329 423 ntBASIC17.24■□□□□ 0.35
SIX5Q8N196 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.24■□□□□ 0.35
SIX5Q8N196 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 AL139327.4-201ENST00000612362 153 ntBASIC17.24■□□□□ 0.35
SIX5Q8N196 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.24■□□□□ 0.35
SIX5Q8N196 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SIX5Q8N196 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIX5Q8N196 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.24■□□□□ 0.35
SIX5Q8N196 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX5Q8N196 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIX5Q8N196 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.24■□□□□ 0.35
SIX5Q8N196 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIX5Q8N196 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SIX5Q8N196 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms