Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AC128676.1-201ENST00000454392 318 ntBASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AC116562.2-201ENST00000507042 360 ntBASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 RPPH1-201ENST00000516869 333 ntBASIC14.1□□□□□ -0.15
ZNF546Q86UE3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AL596087.1-201ENST00000400979 1969 ntBASIC14.1□□□□□ -0.15
ZNF546Q86UE3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.1□□□□□ -0.15
ZNF546Q86UE3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF546Q86UE3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 NUDT16P1-203ENST00000513809 620 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 WWOX-216ENST00000569818 525 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 FAM197Y4-202ENST00000622692 608 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AC112497.1-201ENST00000624824 639 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.09□□□□□ -0.15
ZNF546Q86UE3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF546Q86UE3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF546Q86UE3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF546Q86UE3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
ZNF546Q86UE3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.08□□□□□ -0.15
ZNF546Q86UE3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
ZNF546Q86UE3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms