Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 AC112191.1-201ENST00000523689 701 ntBASIC20.01■□□□□ 0.79
CTR9Q6PD62 AC087641.1-201ENST00000557561 1021 ntBASIC20.01■□□□□ 0.79
CTR9Q6PD62 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTR9Q6PD62 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 AL596442.2-201ENST00000610240 980 ntBASIC20.01■□□□□ 0.79
CTR9Q6PD62 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTR9Q6PD62 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTR9Q6PD62 AL121761.2-201ENST00000598007 1648 ntBASIC20.01■□□□□ 0.79
CTR9Q6PD62 AP001094.4-201ENST00000579008 2176 ntBASIC20.01■□□□□ 0.79
CTR9Q6PD62 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTR9Q6PD62 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.01■□□□□ 0.79
CTR9Q6PD62 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTR9Q6PD62 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 PCDHB17P-201ENST00000539533 2393 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 AC002056.1-201ENST00000395613 760 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 ADH5P3-201ENST00000433842 1137 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20■□□□□ 0.79
CTR9Q6PD62 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CTR9Q6PD62 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20■□□□□ 0.79
CTR9Q6PD62 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CTR9Q6PD62 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 AC124067.4-201ENST00000519691 2379 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTR9Q6PD62 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 TUBB8P12-201ENST00000308911 1335 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 TUBB7P-202ENST00000428444 1305 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 TUBB8P7-204ENST00000567960 1332 ntBASIC20■□□□□ 0.79
CTR9Q6PD62 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTR9Q6PD62 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20■□□□□ 0.79
CTR9Q6PD62 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20■□□□□ 0.79
CTR9Q6PD62 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 AL009183.1-201ENST00000603760 355 ntBASIC19.99■□□□□ 0.79
CTR9Q6PD62 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTR9Q6PD62 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.99■□□□□ 0.79
CTR9Q6PD62 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms