Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 FGFR3P6-201ENST00000457012 610 ntBASIC15.42■□□□□ 0.06
NIPAL3Q6P499 SCARNA2-201ENST00000458748 420 ntBASIC15.42■□□□□ 0.06
NIPAL3Q6P499 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 AL139384.1-201ENST00000612143 3047 ntBASIC15.42■□□□□ 0.06
NIPAL3Q6P499 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 GPR89P-201ENST00000407924 1495 ntBASIC15.41■□□□□ 0.06
NIPAL3Q6P499 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AC004870.1-201ENST00000315132 882 ntBASIC15.41■□□□□ 0.06
NIPAL3Q6P499 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 RN7SL510P-201ENST00000581311 263 ntBASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AC073592.4-201ENST00000623827 446 ntBASIC15.41■□□□□ 0.06
NIPAL3Q6P499 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AC079328.2-201ENST00000561241 3354 ntBASIC15.41■□□□□ 0.06
NIPAL3Q6P499 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL3Q6P499 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.4■□□□□ 0.06
NIPAL3Q6P499 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 SART3-203ENST00000546611 1184 ntBASIC15.4■□□□□ 0.06
NIPAL3Q6P499 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 AL022326.1-202ENST00000641533 845 ntBASIC15.4■□□□□ 0.06
NIPAL3Q6P499 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms