Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC092384.3-202ENST00000564646 2873 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS1BP61024 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS1BP61024 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS1BP61024 AL359258.3-201ENST00000622910 2331 ntBASIC11.92□□□□□ -0.5
CKS1BP61024 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS1BP61024 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
CKS1BP61024 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CKS1BP61024 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.92□□□□□ -0.5
CKS1BP61024 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 UNC93B2-201ENST00000285383 730 ntBASIC11.92□□□□□ -0.5
CKS1BP61024 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 ABHD17AP1-201ENST00000358206 933 ntBASIC11.92□□□□□ -0.5
CKS1BP61024 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CKS1BP61024 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 RPS2P55-201ENST00000397318 883 ntBASIC11.92□□□□□ -0.5
CKS1BP61024 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS1BP61024 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 AC107956.1-201ENST00000494359 873 ntBASIC11.92□□□□□ -0.5
CKS1BP61024 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS1BP61024 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS1BP61024 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 HLA-J-201ENST00000462773 1622 ntBASIC11.92□□□□□ -0.5
CKS1BP61024 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
CKS1BP61024 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
CKS1BP61024 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS1BP61024 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS1BP61024 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CKS1BP61024 AP002414.2-201ENST00000591780 3365 ntBASIC11.91□□□□□ -0.5
CKS1BP61024 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
CKS1BP61024 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS1BP61024 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.91□□□□□ -0.5
CKS1BP61024 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.91□□□□□ -0.5
CKS1BP61024 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CKS1BP61024 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS1BP61024 AC012618.2-201ENST00000428058 849 ntBASIC11.91□□□□□ -0.5
CKS1BP61024 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CKS1BP61024 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.91□□□□□ -0.5
CKS1BP61024 UBE2SP1-201ENST00000450587 669 ntBASIC11.91□□□□□ -0.5
CKS1BP61024 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS1BP61024 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.91□□□□□ -0.5
CKS1BP61024 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS1BP61024 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS1BP61024 AC142381.4-202ENST00000563973 229 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms