Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF2A2P52657 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC079776.1-201ENST00000401540 1152 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 MIR1909-201ENST00000411312 80 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 AL080243.2-201ENST00000418783 582 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC093004.1-201ENST00000508850 424 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC073439.1-201ENST00000624121 1774 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GTF2A2P52657 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GTF2A2P52657 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 AC012317.2-201ENST00000623305 2251 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.28■□□□□ 0.68
GTF2A2P52657 NEFHP1-201ENST00000412845 2629 ntBASIC19.28■□□□□ 0.68
GTF2A2P52657 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF2A2P52657 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GTF2A2P52657 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GTF2A2P52657 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.27■□□□□ 0.68
GTF2A2P52657 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.27■□□□□ 0.68
GTF2A2P52657 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.27■□□□□ 0.68
GTF2A2P52657 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 SPDYE19P-201ENST00000338590 713 ntBASIC19.27■□□□□ 0.68
GTF2A2P52657 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.27■□□□□ 0.68
GTF2A2P52657 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.27■□□□□ 0.68
GTF2A2P52657 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.27■□□□□ 0.68
GTF2A2P52657 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.27■□□□□ 0.68
GTF2A2P52657 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
GTF2A2P52657 DOC2GP-202ENST00000514950 1163 ntBASIC19.27■□□□□ 0.68
GTF2A2P52657 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.27■□□□□ 0.68
GTF2A2P52657 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.27■□□□□ 0.68
GTF2A2P52657 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.27■□□□□ 0.68
GTF2A2P52657 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.27■□□□□ 0.68
GTF2A2P52657 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.27■□□□□ 0.68
GTF2A2P52657 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GTF2A2P52657 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.27■□□□□ 0.67
GTF2A2P52657 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GTF2A2P52657 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 AC016396.2-201ENST00000562575 1417 ntBASIC19.26■□□□□ 0.67
GTF2A2P52657 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
GTF2A2P52657 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GTF2A2P52657 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
GTF2A2P52657 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.26■□□□□ 0.67
GTF2A2P52657 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.26■□□□□ 0.67
GTF2A2P52657 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.26■□□□□ 0.67
GTF2A2P52657 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.26■□□□□ 0.67
GTF2A2P52657 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GTF2A2P52657 RNA5SP410-201ENST00000516285 106 ntBASIC19.26■□□□□ 0.67
GTF2A2P52657 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.26■□□□□ 0.67
GTF2A2P52657 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.26■□□□□ 0.67
GTF2A2P52657 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.26■□□□□ 0.67
GTF2A2P52657 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
GTF2A2P52657 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.26■□□□□ 0.67
GTF2A2P52657 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
GTF2A2P52657 CHCHD2P3-201ENST00000603038 451 ntBASIC19.26■□□□□ 0.67
GTF2A2P52657 AC008494.3-201ENST00000606615 944 ntBASIC19.26■□□□□ 0.67
GTF2A2P52657 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.26■□□□□ 0.67
GTF2A2P52657 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
GTF2A2P52657 AC104581.1-202ENST00000635932 2618 ntBASIC19.26■□□□□ 0.67
GTF2A2P52657 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GTF2A2P52657 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
GTF2A2P52657 AC020763.4-201ENST00000623414 4170 ntBASIC19.25■□□□□ 0.67
GTF2A2P52657 FRMD8P1-201ENST00000440433 1524 ntBASIC19.25■□□□□ 0.67
GTF2A2P52657 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A2P52657 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms