Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CTGFP29279 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.77■□□□□ 0.6
CTGFP29279 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.77■□□□□ 0.6
CTGFP29279 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CTGFP29279 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.77■□□□□ 0.6
CTGFP29279 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.77■□□□□ 0.6
CTGFP29279 AC234783.1-201ENST00000441761 496 ntBASIC18.77■□□□□ 0.6
CTGFP29279 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.77■□□□□ 0.6
CTGFP29279 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTGFP29279 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTGFP29279 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.77■□□□□ 0.6
CTGFP29279 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.77■□□□□ 0.6
CTGFP29279 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.77■□□□□ 0.6
CTGFP29279 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.77■□□□□ 0.6
CTGFP29279 AC133552.6-201ENST00000613406 534 ntBASIC18.77■□□□□ 0.6
CTGFP29279 RPSAP52-203ENST00000622976 1023 ntBASIC18.77■□□□□ 0.6
CTGFP29279 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.77■□□□□ 0.6
CTGFP29279 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTGFP29279 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTGFP29279 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTGFP29279 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.77■□□□□ 0.59
CTGFP29279 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CTGFP29279 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTGFP29279 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTGFP29279 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTGFP29279 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.76■□□□□ 0.59
CTGFP29279 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.76■□□□□ 0.59
CTGFP29279 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.76■□□□□ 0.59
CTGFP29279 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.76■□□□□ 0.59
CTGFP29279 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTGFP29279 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTGFP29279 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.76■□□□□ 0.59
CTGFP29279 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.76■□□□□ 0.59
CTGFP29279 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.76■□□□□ 0.59
CTGFP29279 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTGFP29279 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTGFP29279 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTGFP29279 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.76■□□□□ 0.59
CTGFP29279 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTGFP29279 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTGFP29279 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTGFP29279 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.75■□□□□ 0.59
CTGFP29279 AL133338.1-201ENST00000565695 1517 ntBASIC18.75■□□□□ 0.59
CTGFP29279 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTGFP29279 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTGFP29279 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.75■□□□□ 0.59
CTGFP29279 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.75■□□□□ 0.59
CTGFP29279 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTGFP29279 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CTGFP29279 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CTGFP29279 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.75■□□□□ 0.59
CTGFP29279 MIR8072-201ENST00000614241 80 ntBASIC18.75■□□□□ 0.59
CTGFP29279 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.75■□□□□ 0.59
CTGFP29279 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTGFP29279 KRT8P12-202ENST00000472924 1397 ntBASIC18.75■□□□□ 0.59
CTGFP29279 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTGFP29279 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.75■□□□□ 0.59
CTGFP29279 BICD1-207ENST00000551848 1962 ntBASIC18.75■□□□□ 0.59
CTGFP29279 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTGFP29279 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.74■□□□□ 0.59
CTGFP29279 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTGFP29279 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTGFP29279 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTGFP29279 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTGFP29279 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTGFP29279 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.74■□□□□ 0.59
CTGFP29279 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms