Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
PTPN3P26045 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTPN3P26045 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN3P26045 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 MRPL3P1-201ENST00000400109 1033 ntBASIC17.22■□□□□ 0.35
PTPN3P26045 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PTPN3P26045 AL031284.1-201ENST00000419297 478 ntBASIC17.22■□□□□ 0.35
PTPN3P26045 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 AC117500.6-201ENST00000624871 588 ntBASIC17.22■□□□□ 0.35
PTPN3P26045 AC005593.1-201ENST00000624894 515 ntBASIC17.22■□□□□ 0.35
PTPN3P26045 PGM5P2-202ENST00000637225 1043 ntBASIC17.22■□□□□ 0.35
PTPN3P26045 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTPN3P26045 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN3P26045 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN3P26045 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PTPN3P26045 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN3P26045 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 RNA5SP419-201ENST00000515908 135 ntBASIC17.21■□□□□ 0.35
PTPN3P26045 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
PTPN3P26045 MIR4492-201ENST00000581627 80 ntBASIC17.21■□□□□ 0.35
PTPN3P26045 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.21■□□□□ 0.35
PTPN3P26045 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN3P26045 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 OR6D1P-203ENST00000641209 4860 ntBASIC17.21■□□□□ 0.35
PTPN3P26045 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
PTPN3P26045 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN3P26045 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
PTPN3P26045 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN3P26045 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN3P26045 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN3P26045 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN3P26045 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PTPN3P26045 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTPN3P26045 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTPN3P26045 SNX33P1-201ENST00000592116 1762 ntBASIC17.2■□□□□ 0.34
PTPN3P26045 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 AC006538.1-201ENST00000567905 1585 ntBASIC17.2■□□□□ 0.34
PTPN3P26045 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms