Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA6P23229 FAM8A3P-201ENST00000427218 844 ntBASIC20.69■□□□□ 0.9
ITGA6P23229 BCRP1-201ENST00000444246 691 ntBASIC20.69■□□□□ 0.9
ITGA6P23229 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.69■□□□□ 0.9
ITGA6P23229 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA6P23229 MIR3197-201ENST00000582241 73 ntBASIC20.69■□□□□ 0.9
ITGA6P23229 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA6P23229 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.69■□□□□ 0.9
ITGA6P23229 AC013467.2-201ENST00000605472 835 ntBASIC20.69■□□□□ 0.9
ITGA6P23229 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA6P23229 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA6P23229 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA6P23229 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.69■□□□□ 0.9
ITGA6P23229 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA6P23229 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA6P23229 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA6P23229 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA6P23229 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA6P23229 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGA6P23229 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 ALG1L8P-201ENST00000533887 760 ntBASIC20.68■□□□□ 0.9
ITGA6P23229 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA6P23229 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGA6P23229 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGA6P23229 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.68■□□□□ 0.9
ITGA6P23229 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGA6P23229 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA6P23229 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA6P23229 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
ITGA6P23229 SNX33P1-201ENST00000592116 1762 ntBASIC20.67■□□□□ 0.9
ITGA6P23229 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
ITGA6P23229 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA6P23229 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA6P23229 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGA6P23229 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 AC092364.2-202ENST00000597012 1073 ntBASIC20.67■□□□□ 0.9
ITGA6P23229 AL096865.1-201ENST00000606796 927 ntBASIC20.67■□□□□ 0.9
ITGA6P23229 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ITGA6P23229 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ITGA6P23229 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ITGA6P23229 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA6P23229 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA6P23229 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
ITGA6P23229 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA6P23229 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGA6P23229 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA6P23229 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA6P23229 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGA6P23229 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.66■□□□□ 0.9
ITGA6P23229 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.66■□□□□ 0.9
ITGA6P23229 KLF2P3-201ENST00000451977 1087 ntBASIC20.66■□□□□ 0.9
ITGA6P23229 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGA6P23229 KRT18P34-201ENST00000488218 1270 ntBASIC20.66■□□□□ 0.9
ITGA6P23229 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGA6P23229 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA6P23229 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGA6P23229 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA6P23229 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA6P23229 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms