Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.44■□□□□ 0.86
KCNA3P22001 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KCNA3P22001 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNA3P22001 TMEM261P1-201ENST00000604899 340 ntBASIC20.44■□□□□ 0.86
KCNA3P22001 RPSAP52-203ENST00000622976 1023 ntBASIC20.44■□□□□ 0.86
KCNA3P22001 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.44■□□□□ 0.86
KCNA3P22001 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNA3P22001 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNA3P22001 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNA3P22001 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNA3P22001 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KCNA3P22001 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
KCNA3P22001 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNA3P22001 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 MEP1AP4-201ENST00000423244 1087 ntBASIC20.43■□□□□ 0.86
KCNA3P22001 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNA3P22001 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KCNA3P22001 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.43■□□□□ 0.86
KCNA3P22001 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.43■□□□□ 0.86
KCNA3P22001 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.43■□□□□ 0.86
KCNA3P22001 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.43■□□□□ 0.86
KCNA3P22001 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNA3P22001 AL033527.5-202ENST00000641632 1098 ntBASIC20.43■□□□□ 0.86
KCNA3P22001 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KCNA3P22001 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNA3P22001 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNA3P22001 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 BCYRN1-201ENST00000418539 200 ntBASIC20.42■□□□□ 0.86
KCNA3P22001 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNA3P22001 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNA3P22001 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNA3P22001 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNA3P22001 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
KCNA3P22001 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.42■□□□□ 0.86
KCNA3P22001 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.42■□□□□ 0.86
KCNA3P22001 AC068587.10-201ENST00000641210 219 ntBASIC20.42■□□□□ 0.86
KCNA3P22001 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNA3P22001 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNA3P22001 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
KCNA3P22001 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNA3P22001 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KCNA3P22001 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KCNA3P22001 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
KCNA3P22001 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.41■□□□□ 0.86
KCNA3P22001 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.41■□□□□ 0.86
KCNA3P22001 AC093726.1-201ENST00000608064 963 ntBASIC20.41■□□□□ 0.86
KCNA3P22001 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNA3P22001 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KCNA3P22001 KRT8P12-202ENST00000472924 1397 ntBASIC20.41■□□□□ 0.86
KCNA3P22001 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms