Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.61■□□□□ 0.41
TCF4P15884 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCF4P15884 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 AL450487.1-201ENST00000426799 995 ntBASIC17.61■□□□□ 0.41
TCF4P15884 KRT18P67-201ENST00000432816 1264 ntBASIC17.61■□□□□ 0.41
TCF4P15884 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.61■□□□□ 0.41
TCF4P15884 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.61■□□□□ 0.41
TCF4P15884 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.61■□□□□ 0.41
TCF4P15884 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.61■□□□□ 0.41
TCF4P15884 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.61■□□□□ 0.41
TCF4P15884 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCF4P15884 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.61■□□□□ 0.41
TCF4P15884 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCF4P15884 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
TCF4P15884 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
TCF4P15884 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.6■□□□□ 0.41
TCF4P15884 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 PMS2P1-201ENST00000431037 1228 ntBASIC17.6■□□□□ 0.41
TCF4P15884 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.6■□□□□ 0.41
TCF4P15884 AC136632.2-201ENST00000512891 861 ntBASIC17.6■□□□□ 0.41
TCF4P15884 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TCF4P15884 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.6■□□□□ 0.41
TCF4P15884 AP002490.2-201ENST00000524791 560 ntBASIC17.6■□□□□ 0.41
TCF4P15884 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TCF4P15884 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 MIR4492-201ENST00000581627 80 ntBASIC17.6■□□□□ 0.41
TCF4P15884 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 AC013467.2-201ENST00000605472 835 ntBASIC17.6■□□□□ 0.41
TCF4P15884 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TCF4P15884 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TCF4P15884 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCF4P15884 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TCF4P15884 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TCF4P15884 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 DOC2GP-204ENST00000639052 2548 ntBASIC17.59■□□□□ 0.41
TCF4P15884 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.59■□□□□ 0.41
TCF4P15884 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.59■□□□□ 0.41
TCF4P15884 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.59■□□□□ 0.41
TCF4P15884 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.59■□□□□ 0.41
TCF4P15884 MRPL3P1-201ENST00000400109 1033 ntBASIC17.59■□□□□ 0.41
TCF4P15884 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.59■□□□□ 0.41
TCF4P15884 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCF4P15884 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.59■□□□□ 0.41
TCF4P15884 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TCF4P15884 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.59■□□□□ 0.41
TCF4P15884 AP002469.2-201ENST00000531724 424 ntBASIC17.59■□□□□ 0.41
TCF4P15884 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.59■□□□□ 0.41
TCF4P15884 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.59■□□□□ 0.41
TCF4P15884 MPDU1-223ENST00000582151 728 ntBASIC17.59■□□□□ 0.41
TCF4P15884 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms