Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
LTN1O94822 KRT8P12-202ENST00000472924 1397 ntBASIC22.05■■□□□ 1.12
LTN1O94822 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LTN1O94822 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 GK-202ENST00000378941 458 ntTSL 3 BASIC22.05■■□□□ 1.12
LTN1O94822 VMO1-203ENST00000416307 712 ntTSL 2 BASIC22.05■■□□□ 1.12
LTN1O94822 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.05■■□□□ 1.12
LTN1O94822 NAA38-207ENST00000576861 556 ntTSL 3 BASIC22.05■■□□□ 1.12
LTN1O94822 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
LTN1O94822 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC22.05■■□□□ 1.12
LTN1O94822 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.05■■□□□ 1.12
LTN1O94822 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC22.05■■□□□ 1.12
LTN1O94822 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC22.05■■□□□ 1.12
LTN1O94822 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LTN1O94822 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC22.04■■□□□ 1.12
LTN1O94822 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC22.04■■□□□ 1.12
LTN1O94822 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC22.04■■□□□ 1.12
LTN1O94822 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
LTN1O94822 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
LTN1O94822 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
LTN1O94822 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
LTN1O94822 IMPDH1P4-201ENST00000445028 1534 ntBASIC22.04■■□□□ 1.12
LTN1O94822 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
LTN1O94822 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC22.04■■□□□ 1.12
LTN1O94822 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.04■■□□□ 1.12
LTN1O94822 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC22.04■■□□□ 1.12
LTN1O94822 GIMAP3P-201ENST00000495150 836 ntBASIC22.04■■□□□ 1.12
LTN1O94822 AC135586.1-201ENST00000539323 574 ntBASIC22.04■■□□□ 1.12
LTN1O94822 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC22.04■■□□□ 1.12
LTN1O94822 AC024267.1-201ENST00000582320 895 ntBASIC22.04■■□□□ 1.12
LTN1O94822 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC22.04■■□□□ 1.12
LTN1O94822 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 BTBD7P1-201ENST00000447253 1453 ntBASIC22.04■■□□□ 1.12
LTN1O94822 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LTN1O94822 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 AL031731.1-201ENST00000642131 2094 ntBASIC22.03■■□□□ 1.12
LTN1O94822 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC22.03■■□□□ 1.12
LTN1O94822 HILS1-202ENST00000545329 423 ntBASIC22.03■■□□□ 1.12
LTN1O94822 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC22.03■■□□□ 1.12
LTN1O94822 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LTN1O94822 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC22.03■■□□□ 1.12
LTN1O94822 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LTN1O94822 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.03■■□□□ 1.12
LTN1O94822 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
LTN1O94822 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.02■■□□□ 1.12
LTN1O94822 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
LTN1O94822 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
LTN1O94822 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LTN1O94822 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
LTN1O94822 DGCR5-201ENST00000399539 862 ntBASIC22.02■■□□□ 1.12
LTN1O94822 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
LTN1O94822 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LTN1O94822 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.02■■□□□ 1.12
LTN1O94822 AC132938.2-201ENST00000579188 680 ntBASIC22.02■■□□□ 1.12
LTN1O94822 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.02■■□□□ 1.12
LTN1O94822 AL591163.1-201ENST00000641757 987 ntBASIC22.02■■□□□ 1.12
LTN1O94822 AL139011.1-202ENST00000642063 584 ntBASIC22.02■■□□□ 1.12
LTN1O94822 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LTN1O94822 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC22.02■■□□□ 1.12
LTN1O94822 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC22.02■■□□□ 1.12
LTN1O94822 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LTN1O94822 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LTN1O94822 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LTN1O94822 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.02■■□□□ 1.12
LTN1O94822 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LTN1O94822 AL391825.1-201ENST00000457671 1364 ntBASIC22.02■■□□□ 1.12
LTN1O94822 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms