Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AP001269.4-201ENST00000609611 512 ntBASIC17.16■□□□□ 0.34
USP1O94782 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.16■□□□□ 0.34
USP1O94782 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP1O94782 AC079328.2-201ENST00000561241 3354 ntBASIC17.16■□□□□ 0.34
USP1O94782 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.16■□□□□ 0.34
USP1O94782 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.16■□□□□ 0.34
USP1O94782 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
USP1O94782 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.15■□□□□ 0.34
USP1O94782 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 AL450487.1-201ENST00000426799 995 ntBASIC17.15■□□□□ 0.34
USP1O94782 DUSP5P1-201ENST00000441325 1139 ntBASIC17.15■□□□□ 0.34
USP1O94782 AC132008.2-207ENST00000454517 770 ntBASIC17.15■□□□□ 0.34
USP1O94782 AC106795.1-205ENST00000512851 1056 ntBASIC17.15■□□□□ 0.34
USP1O94782 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.15■□□□□ 0.34
USP1O94782 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.15■□□□□ 0.34
USP1O94782 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP1O94782 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
USP1O94782 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.15■□□□□ 0.34
USP1O94782 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
USP1O94782 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USP1O94782 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP1O94782 AL021920.2-201ENST00000624828 1351 ntBASIC17.15■□□□□ 0.34
USP1O94782 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.15■□□□□ 0.34
USP1O94782 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP1O94782 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.34
USP1O94782 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
USP1O94782 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP1O94782 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.14■□□□□ 0.33
USP1O94782 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.14■□□□□ 0.33
USP1O94782 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.14■□□□□ 0.33
USP1O94782 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.14■□□□□ 0.33
USP1O94782 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.14■□□□□ 0.33
USP1O94782 AL353135.1-201ENST00000606729 504 ntBASIC17.14■□□□□ 0.33
USP1O94782 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.14■□□□□ 0.33
USP1O94782 AL691432.3-201ENST00000621860 400 ntBASIC17.14■□□□□ 0.33
USP1O94782 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.14■□□□□ 0.33
USP1O94782 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP1O94782 AL590787.1-201ENST00000568856 1315 ntBASIC17.14■□□□□ 0.33
USP1O94782 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP1O94782 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
USP1O94782 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 AC132872.4-202ENST00000622924 2756 ntBASIC17.13■□□□□ 0.33
USP1O94782 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
USP1O94782 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms