Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCAMP3O14828 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCAMP3O14828 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.46■□□□□ 0.38
SCAMP3O14828 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.46■□□□□ 0.38
SCAMP3O14828 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 AL645939.2-201ENST00000427340 991 ntBASIC17.45■□□□□ 0.38
SCAMP3O14828 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.45■□□□□ 0.38
SCAMP3O14828 SPDYE11-202ENST00000450699 704 ntBASIC17.45■□□□□ 0.38
SCAMP3O14828 SPDYE9P-201ENST00000570642 692 ntBASIC17.45■□□□□ 0.38
SCAMP3O14828 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 AC026120.1-201ENST00000611536 926 ntBASIC17.45■□□□□ 0.38
SCAMP3O14828 SPDYE10P-202ENST00000612005 668 ntBASIC17.45■□□□□ 0.38
SCAMP3O14828 SPDYE8P-202ENST00000612377 668 ntBASIC17.45■□□□□ 0.38
SCAMP3O14828 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SCAMP3O14828 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SCAMP3O14828 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAMP3O14828 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP3O14828 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.44■□□□□ 0.38
SCAMP3O14828 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.44■□□□□ 0.38
SCAMP3O14828 AC005237.2-201ENST00000434368 219 ntBASIC17.44■□□□□ 0.38
SCAMP3O14828 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 AC079140.1-201ENST00000508039 487 ntBASIC17.44■□□□□ 0.38
SCAMP3O14828 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.44■□□□□ 0.38
SCAMP3O14828 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.44■□□□□ 0.38
SCAMP3O14828 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.44■□□□□ 0.38
SCAMP3O14828 AL135744.1-201ENST00000565098 629 ntBASIC17.44■□□□□ 0.38
SCAMP3O14828 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
SCAMP3O14828 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCAMP3O14828 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCAMP3O14828 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SCAMP3O14828 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
SCAMP3O14828 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SCAMP3O14828 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCAMP3O14828 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SCAMP3O14828 AL121761.2-201ENST00000598007 1648 ntBASIC17.43■□□□□ 0.38
SCAMP3O14828 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAMP3O14828 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAMP3O14828 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAMP3O14828 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAMP3O14828 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.43■□□□□ 0.38
SCAMP3O14828 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAMP3O14828 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAMP3O14828 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms