Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AC254562.1-201ENST00000417586 456 ntBASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 CNN2P11-201ENST00000429351 262 ntBASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AL513480.1-201ENST00000451731 511 ntBASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 AC108860.2-201ENST00000562760 2183 ntBASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 KRT18P28-201ENST00000453838 1332 ntBASIC15.4■□□□□ 0.06
NPIPA3F8WFD2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 METTL21AP1-201ENST00000438852 635 ntBASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 FAM185BP-201ENST00000443595 716 ntBASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PAWRP1-201ENST00000451083 565 ntBASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AL031432.2-201ENST00000566714 459 ntBASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AL928711.1-201ENST00000570165 459 ntBASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AC027796.2-201ENST00000575326 344 ntBASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA3F8WFD2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA3F8WFD2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms