Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 HLA-J-202ENST00000469281 1241 ntBASIC17.56■□□□□ 0.4
SRRM3A6NNA2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 AL591684.3-201ENST00000605187 298 ntBASIC17.56■□□□□ 0.4
SRRM3A6NNA2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 AL592071.1-201ENST00000611956 408 ntBASIC17.56■□□□□ 0.4
SRRM3A6NNA2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 AC124864.1-201ENST00000623408 392 ntBASIC17.56■□□□□ 0.4
SRRM3A6NNA2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 AC023824.1-201ENST00000562945 2975 ntBASIC17.55■□□□□ 0.4
SRRM3A6NNA2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 AP005901.3-202ENST00000581653 237 ntBASIC17.55■□□□□ 0.4
SRRM3A6NNA2 MIR3180-5-201ENST00000583743 153 ntBASIC17.55■□□□□ 0.4
SRRM3A6NNA2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 AC092053.1-201ENST00000605787 1936 ntBASIC17.55■□□□□ 0.4
SRRM3A6NNA2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRRM3A6NNA2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 RPS2P28-201ENST00000314255 741 ntBASIC17.54■□□□□ 0.4
SRRM3A6NNA2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.54■□□□□ 0.4
SRRM3A6NNA2 POM121L3P-201ENST00000419331 1163 ntBASIC17.54■□□□□ 0.4
SRRM3A6NNA2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.54■□□□□ 0.4
SRRM3A6NNA2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 MIR3180-4-201ENST00000582223 153 ntBASIC17.54■□□□□ 0.4
SRRM3A6NNA2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms