Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 MIR6069-201ENST00000620069 79 ntBASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 SPDYE17-201ENST00000412399 783 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 AC006033.1-201ENST00000440505 426 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 RARRES2P5-201ENST00000564013 466 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 AC010328.2-201ENST00000597698 1111 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 AL365330.1-201ENST00000607459 531 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 EGFEM1P-202ENST00000431685 1563 ntBASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM88BA6NKF7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 SLC25A24-204ENST00000569674 2357 ntBASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 AC073130.3-201ENST00000624389 2278 ntBASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 CROCCP3-202ENST00000420820 1947 ntBASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM88BA6NKF7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TMEM88BA6NKF7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 ACTG1P3-201ENST00000431775 1114 ntBASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 CALR4P-201ENST00000431943 946 ntBASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 YBX1P6-201ENST00000442962 1002 ntBASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 MPRIPP1-201ENST00000452433 1089 ntBASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM88BA6NKF7 MIR5189-201ENST00000577370 114 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms