Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL645728.1-201ENST00000366221 2101 ntBASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC016734.2-201ENST00000624325 1377 ntBASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC079328.2-201ENST00000561241 3354 ntBASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL031133.1-201ENST00000406807 723 ntBASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC233702.3-201ENST00000578656 1387 ntBASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-7A0A0A0MS04 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC005332.1-201ENST00000577698 1310 ntBASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-7A0A0A0MS04 TMPOP1-202ENST00000424642 1267 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms