Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 AC069335.1-201ENST00000489972 472 ntBASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 AL512356.2-201ENST00000546955 174 ntBASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 SPCS2P1-201ENST00000561636 679 ntBASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 AL135744.1-201ENST00000565098 629 ntBASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 AC012317.2-201ENST00000623305 2251 ntBASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 KRT8P23-201ENST00000560090 1207 ntBASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 AC091167.2-201ENST00000579581 588 ntBASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 AL096865.1-201ENST00000606796 927 ntBASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.52■□□□□ 0.24
CSNK1G3Q9Y6M4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSNK1G3Q9Y6M4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 AC092474.2-201ENST00000424288 719 ntBASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 DUX4L17-201ENST00000557360 1267 ntBASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms