Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB6Q9Y5F9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC008741.2-201ENST00000612792 3115 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AGGF1P2-201ENST00000426656 2106 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC003669.1-201ENST00000334569 611 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 BX842568.4-201ENST00000421222 227 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 MED15P5-201ENST00000423150 992 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 UNC93B6-202ENST00000528242 690 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC140113.2-201ENST00000604370 208 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AC103702.1-201ENST00000548801 2630 ntBASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB6Q9Y5F9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 CROCCP2-202ENST00000412962 2773 ntBASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AL355312.1-201ENST00000407115 2176 ntBASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AC073621.1-201ENST00000392730 636 ntBASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AC136632.2-201ENST00000512891 861 ntBASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 AC005593.1-201ENST00000624894 515 ntBASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB6Q9Y5F9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 AP002414.3-201ENST00000589352 1468 ntBASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGB6Q9Y5F9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms