Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 AC093525.9-201ENST00000624961 1746 ntBASIC21.26■□□□□ 0.99
CCNL1Q9UK58 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNL1Q9UK58 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 AC119751.2-201ENST00000504529 210 ntBASIC21.25■□□□□ 0.99
CCNL1Q9UK58 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNL1Q9UK58 AC104581.1-202ENST00000635932 2618 ntBASIC21.25■□□□□ 0.99
CCNL1Q9UK58 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 FRMD8P1-201ENST00000440433 1524 ntBASIC21.24■□□□□ 0.99
CCNL1Q9UK58 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 TMEM14DP-201ENST00000422205 345 ntBASIC21.24■□□□□ 0.99
CCNL1Q9UK58 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 AC114501.2-201ENST00000439631 535 ntBASIC21.24■□□□□ 0.99
CCNL1Q9UK58 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNL1Q9UK58 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 AC092552.1-201ENST00000547243 906 ntBASIC21.23■□□□□ 0.99
CCNL1Q9UK58 AC084346.2-201ENST00000607097 949 ntBASIC21.23■□□□□ 0.99
CCNL1Q9UK58 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNL1Q9UK58 ABALON-201ENST00000629058 1903 ntBASIC21.23■□□□□ 0.99
CCNL1Q9UK58 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms