Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 PAWRP1-201ENST00000451083 565 ntBASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 AP000344.2-201ENST00000512987 629 ntBASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 AC068137.2-201ENST00000605408 478 ntBASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 ACTL9-202ENST00000612068 1252 ntBASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 AC106028.4-201ENST00000614509 607 ntBASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 AC133963.1-201ENST00000504166 1679 ntBASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 AC092919.2-201ENST00000623631 1645 ntBASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 AL138688.1-201ENST00000624851 1594 ntBASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 AL139400.1-201ENST00000366220 510 ntBASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 AL513480.1-201ENST00000451731 511 ntBASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC6Q9UBN7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 TSEN15P1-201ENST00000423257 515 ntBASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 SLC25A6P2-201ENST00000497974 877 ntBASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 AL139327.4-201ENST00000612362 153 ntBASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 AC093028.1-201ENST00000622998 982 ntBASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 AL513210.1-201ENST00000629608 234 ntBASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC6Q9UBN7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 AC004461.1-201ENST00000412461 403 ntBASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms