Protein–RNA interactions for Protein: Q9NQX3

GPHN, Gephyrin, humanhuman

Predicted RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPHNQ9NQX3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.9■□□□□ 0.78
GPHNQ9NQX3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
GPHNQ9NQX3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.9■□□□□ 0.78
GPHNQ9NQX3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.9■□□□□ 0.78
GPHNQ9NQX3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GPHNQ9NQX3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 AC007967.2-201ENST00000432613 625 ntBASIC19.89■□□□□ 0.77
GPHNQ9NQX3 VN2R19P-201ENST00000442399 1052 ntBASIC19.89■□□□□ 0.77
GPHNQ9NQX3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GPHNQ9NQX3 AL671710.1-201ENST00000610245 2349 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 HCG4B-203ENST00000450128 991 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 AC092183.1-201ENST00000469884 875 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 RNA5SP416-201ENST00000516838 111 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 MIR3687-2-201ENST00000577708 61 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 MIR3687-1-201ENST00000614492 61 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 AL691403.2-201ENST00000618460 490 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 AL391256.1-201ENST00000443260 1855 ntBASIC19.88■□□□□ 0.77
GPHNQ9NQX3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.88■□□□□ 0.77
GPHNQ9NQX3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 TOP3BP1-201ENST00000420768 1380 ntBASIC19.87■□□□□ 0.77
GPHNQ9NQX3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.87■□□□□ 0.77
GPHNQ9NQX3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 AC040169.1-201ENST00000565382 521 ntBASIC19.87■□□□□ 0.77
GPHNQ9NQX3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 SNX33P1-201ENST00000592116 1762 ntBASIC19.87■□□□□ 0.77
GPHNQ9NQX3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPHNQ9NQX3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 TUBB8P12-201ENST00000308911 1335 ntBASIC19.86■□□□□ 0.77
GPHNQ9NQX3 TUBB7P-202ENST00000428444 1305 ntBASIC19.86■□□□□ 0.77
GPHNQ9NQX3 TUBB8P7-204ENST00000567960 1332 ntBASIC19.86■□□□□ 0.77
GPHNQ9NQX3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPHNQ9NQX3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.86■□□□□ 0.77
GPHNQ9NQX3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms