Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BX005266.1-201ENST00000473402 457 ntBASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 LINC00895-201ENST00000629028 1637 ntBASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 KRT8P49-201ENST00000604166 1432 ntBASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 AL662844.4-201ENST00000606367 2838 ntBASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 UPK3BP1-201ENST00000428678 509 ntBASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 AC093458.2-201ENST00000623150 629 ntBASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRTM1Q9HBL6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 TERC-201ENST00000602385 541 ntBASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 AL022326.1-202ENST00000641533 845 ntBASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 NCF1C-201ENST00000438382 1427 ntBASIC16.28■□□□□ 0.2
LRTM1Q9HBL6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms