Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 DERL2-206ENST00000572834 589 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ROCK1P1-201ENST00000573767 549 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 BNIP3P9-201ENST00000603714 553 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AL365434.2-201ENST00000607979 234 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AP001437.1-201ENST00000608783 456 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 DSTYK-203ENST00000615388 1042 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC127071.2-201ENST00000623293 527 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009084.3-201ENST00000623356 437 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AL078595.2-201ENST00000605309 1780 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AL603750.1-201ENST00000624216 1717 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC067942.1-201ENST00000488045 1493 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC092338.2-201ENST00000568827 1415 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 RNU6-1318P-201ENST00000365389 103 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 NDUFB5P2-201ENST00000398690 566 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AL354751.2-201ENST00000415471 210 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 OSTCP5-201ENST00000425293 453 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 ARL6IP1P2-201ENST00000431356 563 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 GOLGA5P1-201ENST00000507317 980 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC110056.1-201ENST00000525759 911 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 NPM1P5-201ENST00000557228 838 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC122134.1-201ENST00000565664 1104 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AL354943.1-201ENST00000572103 781 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AL159169.3-201ENST00000608871 561 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC013476.2-201ENST00000614456 459 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AC004687.1-201ENST00000579003 1625 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 SLC25A24-204ENST00000569674 2357 ntBASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 AL136181.1-201ENST00000454484 1924 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-3Q9BYR6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC079610.1-201ENST00000360083 1727 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 TAF1A-AS1-201ENST00000413074 1313 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms