Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BRIP1Q9BX63 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BRIP1Q9BX63 NOC2LP2-201ENST00000407594 1944 ntBASIC20.76■□□□□ 0.91
BRIP1Q9BX63 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 FAM220BP-201ENST00000377689 816 ntBASIC20.76■□□□□ 0.91
BRIP1Q9BX63 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 AC004840.1-201ENST00000636359 365 ntBASIC20.76■□□□□ 0.91
BRIP1Q9BX63 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BRIP1Q9BX63 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 IGHV3-71-201ENST00000523324 359 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 RN7SL828P-201ENST00000607615 303 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 AL589739.1-201ENST00000607720 493 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.75■□□□□ 0.91
BRIP1Q9BX63 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRIP1Q9BX63 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 AL021920.2-201ENST00000624828 1351 ntBASIC20.74■□□□□ 0.91
BRIP1Q9BX63 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 SLC25A1P3-201ENST00000395415 828 ntBASIC20.74■□□□□ 0.91
BRIP1Q9BX63 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRIP1Q9BX63 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 GIMAP3P-201ENST00000495150 836 ntBASIC20.73■□□□□ 0.91
BRIP1Q9BX63 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms