Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 AC015911.4-201ENST00000588022 1070 ntBASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 AP001059.3-201ENST00000619053 235 ntBASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 HTR7P1-202ENST00000624664 4411 ntBASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.94■□□□□ 0.46
PAAF1Q9BRP4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC008677.1-201ENST00000519230 1561 ntBASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC069262.1-201ENST00000539058 672 ntBASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AL512356.2-201ENST00000546955 174 ntBASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 KRT8P23-201ENST00000560090 1207 ntBASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC008267.7-201ENST00000624570 1194 ntBASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 AC060834.1-201ENST00000443027 2032 ntBASIC17.93■□□□□ 0.46
PAAF1Q9BRP4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 MIR346-201ENST00000362234 95 ntBASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AC051619.7-201ENST00000568314 623 ntBASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PAAF1Q9BRP4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 AL023806.1-201ENST00000603994 1649 ntBASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 AL645608.8-201ENST00000606034 2086 ntBASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms