Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VRK1Q99986 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.03■□□□□ -0
VRK1Q99986 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.03■□□□□ -0
VRK1Q99986 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.03■□□□□ -0
VRK1Q99986 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 HLA-J-201ENST00000462773 1622 ntBASIC15.03■□□□□ -0
VRK1Q99986 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.02■□□□□ -0
VRK1Q99986 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.02■□□□□ -0
VRK1Q99986 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 PCDHA1-201ENST00000378133 2726 ntBASIC15.02■□□□□ -0
VRK1Q99986 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VRK1Q99986 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.02■□□□□ -0
VRK1Q99986 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
VRK1Q99986 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 BX005266.1-201ENST00000473402 457 ntBASIC15.02■□□□□ -0
VRK1Q99986 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK1Q99986 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.02■□□□□ -0
VRK1Q99986 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.02■□□□□ -0
VRK1Q99986 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.02■□□□□ -0
VRK1Q99986 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.02■□□□□ -0
VRK1Q99986 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.02■□□□□ -0
VRK1Q99986 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.02■□□□□ -0
VRK1Q99986 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.02■□□□□ -0
VRK1Q99986 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.02■□□□□ -0
VRK1Q99986 CROCCP2-202ENST00000412962 2773 ntBASIC15.02□□□□□ -0.01
VRK1Q99986 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.02□□□□□ -0.01
VRK1Q99986 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
VRK1Q99986 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.02□□□□□ -0.01
VRK1Q99986 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
VRK1Q99986 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
VRK1Q99986 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
VRK1Q99986 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK1Q99986 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.01□□□□□ -0.01
VRK1Q99986 AC243591.1-201ENST00000452967 1364 ntBASIC15.01□□□□□ -0.01
VRK1Q99986 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 AC106886.4-201ENST00000623557 2502 ntBASIC15.01□□□□□ -0.01
VRK1Q99986 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.01□□□□□ -0.01
VRK1Q99986 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
VRK1Q99986 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.01□□□□□ -0.01
VRK1Q99986 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 MIR940-201ENST00000401276 94 ntBASIC15.01□□□□□ -0.01
VRK1Q99986 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.01□□□□□ -0.01
VRK1Q99986 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 MIR7706-201ENST00000613747 67 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms