Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
DDX11Q96FC9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX11Q96FC9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 AC023274.1-201ENST00000418278 595 ntBASIC20.11■□□□□ 0.81
DDX11Q96FC9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 AC002347.1-201ENST00000569543 541 ntBASIC20.11■□□□□ 0.81
DDX11Q96FC9 AC064836.3-201ENST00000607928 673 ntBASIC20.11■□□□□ 0.81
DDX11Q96FC9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
DDX11Q96FC9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX11Q96FC9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 RPS8P6-201ENST00000426177 609 ntBASIC20.1■□□□□ 0.81
DDX11Q96FC9 AC004832.2-201ENST00000426397 482 ntBASIC20.1■□□□□ 0.81
DDX11Q96FC9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 SIGLEC30P-201ENST00000455569 941 ntBASIC20.1■□□□□ 0.81
DDX11Q96FC9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 AC004706.3-202ENST00000621574 984 ntBASIC20.1■□□□□ 0.81
DDX11Q96FC9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX11Q96FC9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX11Q96FC9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX11Q96FC9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms