Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 MIR1233-2-201ENST00000408138 82 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 MIR1233-1-201ENST00000408722 82 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 PMS2P4-201ENST00000412466 1052 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 ADH5P3-201ENST00000433842 1137 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 AC099522.2-201ENST00000607001 744 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 ELL2P1-201ENST00000413990 1906 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 AC106820.2-201ENST00000563775 3264 ntBASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ECHDC3Q96DC8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 AC092474.2-201ENST00000424288 719 ntBASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 AC139530.3-201ENST00000620344 690 ntBASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 AC055717.3-201ENST00000622967 595 ntBASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 AC080080.1-201ENST00000625121 2420 ntBASIC16.84■□□□□ 0.29
ECHDC3Q96DC8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ECHDC3Q96DC8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms