Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4DQ92854 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4DQ92854 AL590627.1-203ENST00000421194 1026 ntBASIC18.17■□□□□ 0.5
SEMA4DQ92854 VN2R19P-201ENST00000442399 1052 ntBASIC18.17■□□□□ 0.5
SEMA4DQ92854 FAM185BP-201ENST00000443595 716 ntBASIC18.17■□□□□ 0.5
SEMA4DQ92854 AP002490.2-201ENST00000524791 560 ntBASIC18.17■□□□□ 0.5
SEMA4DQ92854 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.17■□□□□ 0.5
SEMA4DQ92854 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SEMA4DQ92854 AC145285.3-201ENST00000564603 959 ntBASIC18.17■□□□□ 0.5
SEMA4DQ92854 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4DQ92854 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4DQ92854 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4DQ92854 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SEMA4DQ92854 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 AC131009.4-201ENST00000624048 1740 ntBASIC18.16■□□□□ 0.5
SEMA4DQ92854 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.16■□□□□ 0.5
SEMA4DQ92854 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 HCG4B-203ENST00000450128 991 ntBASIC18.16■□□□□ 0.5
SEMA4DQ92854 RPL13AP23-201ENST00000480739 586 ntBASIC18.16■□□□□ 0.5
SEMA4DQ92854 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4DQ92854 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4DQ92854 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 AC091167.2-201ENST00000579581 588 ntBASIC18.15■□□□□ 0.5
SEMA4DQ92854 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4DQ92854 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4DQ92854 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4DQ92854 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.14■□□□□ 0.5
SEMA4DQ92854 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4DQ92854 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4DQ92854 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4DQ92854 AL353732.1-201ENST00000569618 1459 ntBASIC18.14■□□□□ 0.5
SEMA4DQ92854 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4DQ92854 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4DQ92854 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.14■□□□□ 0.5
SEMA4DQ92854 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 BX640515.1-201ENST00000617215 977 ntBASIC18.14■□□□□ 0.49
SEMA4DQ92854 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms