Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 AC139713.2-201ENST00000641328 2723 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.99■■□□□ 1.11
RTF1Q92541 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 PMS2P4-201ENST00000412466 1052 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.99■■□□□ 1.11
RTF1Q92541 TSEN15P1-201ENST00000423257 515 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.99■■□□□ 1.11
RTF1Q92541 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RTF1Q92541 MIR4492-201ENST00000581627 80 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RTF1Q92541 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 AC092068.3-201ENST00000587894 2016 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.98■■□□□ 1.11
RTF1Q92541 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.98■■□□□ 1.11
RTF1Q92541 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RTF1Q92541 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.98■■□□□ 1.11
RTF1Q92541 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.98■■□□□ 1.11
RTF1Q92541 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.98■■□□□ 1.11
RTF1Q92541 AC023141.5-201ENST00000458585 616 ntBASIC21.98■■□□□ 1.11
RTF1Q92541 AC079140.1-201ENST00000508039 487 ntBASIC21.98■■□□□ 1.11
RTF1Q92541 AC243562.1-201ENST00000560672 389 ntBASIC21.98■■□□□ 1.11
RTF1Q92541 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 MIR3909-201ENST00000579518 119 ntBASIC21.98■■□□□ 1.11
RTF1Q92541 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RTF1Q92541 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.98■■□□□ 1.11
RTF1Q92541 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTF1Q92541 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.97■■□□□ 1.11
RTF1Q92541 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.97■■□□□ 1.11
RTF1Q92541 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTF1Q92541 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 AC005237.2-201ENST00000434368 219 ntBASIC21.97■■□□□ 1.11
RTF1Q92541 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.97■■□□□ 1.11
RTF1Q92541 AL592309.1-201ENST00000443127 649 ntBASIC21.97■■□□□ 1.11
RTF1Q92541 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.97■■□□□ 1.11
RTF1Q92541 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTF1Q92541 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.97■■□□□ 1.11
RTF1Q92541 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.97■■□□□ 1.11
RTF1Q92541 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTF1Q92541 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTF1Q92541 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTF1Q92541 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTF1Q92541 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTF1Q92541 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTF1Q92541 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.96■■□□□ 1.11
RTF1Q92541 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTF1Q92541 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.96■■□□□ 1.11
RTF1Q92541 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTF1Q92541 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.96■■□□□ 1.11
RTF1Q92541 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms