Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 MIR1199-201ENST00000621445 119 ntBASIC16.56■□□□□ 0.24
ATL1Q8WXF7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 PTCHD3P3-201ENST00000403073 906 ntBASIC16.55■□□□□ 0.24
ATL1Q8WXF7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 RPS2P1-201ENST00000434010 821 ntBASIC16.55■□□□□ 0.24
ATL1Q8WXF7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 PAWRP1-201ENST00000451083 565 ntBASIC16.55■□□□□ 0.24
ATL1Q8WXF7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 KRT126P-201ENST00000549467 1181 ntBASIC16.55■□□□□ 0.24
ATL1Q8WXF7 DUX4L17-201ENST00000557360 1267 ntBASIC16.55■□□□□ 0.24
ATL1Q8WXF7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 GGTLC5P-201ENST00000617623 998 ntBASIC16.55■□□□□ 0.24
ATL1Q8WXF7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATL1Q8WXF7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 AL118508.1-201ENST00000613502 2345 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 KRT8P49-201ENST00000604166 1432 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 NKILA-202ENST00000614771 2598 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 AC106886.4-201ENST00000623557 2502 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 ELK2BP-201ENST00000415014 1224 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 KRT18P27-201ENST00000427733 1299 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 AC136632.2-201ENST00000512891 861 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 AC008735.5-201ENST00000623544 497 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PGM5P2-202ENST00000637225 1043 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 AC006504.4-201ENST00000592118 1568 ntBASIC16.54■□□□□ 0.24
ATL1Q8WXF7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms