Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 HMGA1P7-201ENST00000406908 502 ntBASIC17.2■□□□□ 0.34
CHPFQ8IZ52 AL627223.1-201ENST00000416693 442 ntBASIC17.2■□□□□ 0.34
CHPFQ8IZ52 RN7SL589P-201ENST00000481268 310 ntBASIC17.2■□□□□ 0.34
CHPFQ8IZ52 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 KRT8P48-201ENST00000515599 1220 ntBASIC17.2■□□□□ 0.34
CHPFQ8IZ52 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 AC093512.1-201ENST00000617969 520 ntBASIC17.2■□□□□ 0.34
CHPFQ8IZ52 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 AC099398.1-201ENST00000567919 2776 ntBASIC17.19■□□□□ 0.34
CHPFQ8IZ52 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 AL592309.1-201ENST00000443127 649 ntBASIC17.19■□□□□ 0.34
CHPFQ8IZ52 AC109322.1-201ENST00000524499 1264 ntBASIC17.19■□□□□ 0.34
CHPFQ8IZ52 MIR3197-201ENST00000582241 73 ntBASIC17.19■□□□□ 0.34
CHPFQ8IZ52 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
CHPFQ8IZ52 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC012313.1-201ENST00000593393 3059 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 TFAMP1-201ENST00000412727 736 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 FAM86GP-201ENST00000448322 971 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC079140.1-201ENST00000508039 487 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC093520.2-201ENST00000561830 333 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 RARRES2P8-201ENST00000566335 367 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC092364.2-202ENST00000597012 1073 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 AL161645.1-201ENST00000622716 1255 ntBASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms