Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 KRT8P39-201ENST00000396270 1433 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 ZNF767P-206ENST00000513792 565 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AL109936.8-201ENST00000641772 604 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AL035456.1-201ENST00000456064 1369 ntBASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AL589987.1-201ENST00000453380 819 ntBASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC093004.1-201ENST00000508850 424 ntBASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AL583810.1-201ENST00000553344 1045 ntBASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13DQ5THJ4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC087499.6-201ENST00000411576 835 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 SLC25A6P5-201ENST00000435663 894 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC006277.1-201ENST00000624348 1610 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 NOC2LP1-202ENST00000452600 2235 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 KRT8P12-202ENST00000472924 1397 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC135050.7-201ENST00000624508 2218 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 RNA5SP423-201ENST00000517127 109 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AC017083.2-201ENST00000608069 979 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms