Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.29■□□□□ 0.2
HLA-BQ31612 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-BQ31612 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.29■□□□□ 0.2
HLA-BQ31612 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-BQ31612 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HLA-BQ31612 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-BQ31612 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.29■□□□□ 0.2
HLA-BQ31612 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-BQ31612 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-BQ31612 FRMD8P1-201ENST00000440433 1524 ntBASIC16.29■□□□□ 0.2
HLA-BQ31612 FOXO1B-201ENST00000504678 1527 ntBASIC16.29■□□□□ 0.2
HLA-BQ31612 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-BQ31612 CU639417.3-201ENST00000624240 1404 ntBASIC16.28■□□□□ 0.2
HLA-BQ31612 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-BQ31612 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-BQ31612 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-BQ31612 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-BQ31612 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-BQ31612 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-BQ31612 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
HLA-BQ31612 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-BQ31612 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HLA-BQ31612 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-BQ31612 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-BQ31612 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-BQ31612 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-BQ31612 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-BQ31612 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-BQ31612 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-BQ31612 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 AL354751.1-201ENST00000412768 1863 ntBASIC16.27■□□□□ 0.2
HLA-BQ31612 AC087499.5-201ENST00000452760 1342 ntBASIC16.27■□□□□ 0.2
HLA-BQ31612 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-BQ31612 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-BQ31612 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-BQ31612 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 MTND6P24-201ENST00000440466 518 ntBASIC16.27■□□□□ 0.2
HLA-BQ31612 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-BQ31612 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-BQ31612 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 AC009407.1-201ENST00000568958 598 ntBASIC16.27■□□□□ 0.2
HLA-BQ31612 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-BQ31612 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-BQ31612 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HLA-BQ31612 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-BQ31612 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
HLA-BQ31612 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-BQ31612 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-BQ31612 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
HLA-BQ31612 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms