Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.78■□□□□ 0.44
USP46P62068 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.78■□□□□ 0.44
USP46P62068 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.78■□□□□ 0.44
USP46P62068 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.78■□□□□ 0.44
USP46P62068 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.78■□□□□ 0.44
USP46P62068 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP46P62068 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
USP46P62068 AL513477.1-201ENST00000602865 2407 ntBASIC17.78■□□□□ 0.44
USP46P62068 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
USP46P62068 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP46P62068 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 SLC22A20-204ENST00000530038 1673 ntBASIC17.77■□□□□ 0.44
USP46P62068 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.77■□□□□ 0.44
USP46P62068 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
USP46P62068 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.77■□□□□ 0.44
USP46P62068 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.77■□□□□ 0.44
USP46P62068 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.77■□□□□ 0.44
USP46P62068 MIR4515-201ENST00000584082 81 ntBASIC17.77■□□□□ 0.44
USP46P62068 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.77■□□□□ 0.44
USP46P62068 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
USP46P62068 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP46P62068 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.77■□□□□ 0.43
USP46P62068 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP46P62068 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP46P62068 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.77■□□□□ 0.43
USP46P62068 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP46P62068 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP46P62068 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP46P62068 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.77■□□□□ 0.43
USP46P62068 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.76■□□□□ 0.43
USP46P62068 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP46P62068 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
USP46P62068 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.76■□□□□ 0.43
USP46P62068 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP46P62068 HMGA1P7-201ENST00000406908 502 ntBASIC17.76■□□□□ 0.43
USP46P62068 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.76■□□□□ 0.43
USP46P62068 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.76■□□□□ 0.43
USP46P62068 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
USP46P62068 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.76■□□□□ 0.43
USP46P62068 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 AC005412.3-201ENST00000580309 715 ntBASIC17.76■□□□□ 0.43
USP46P62068 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.76■□□□□ 0.43
USP46P62068 AL645728.2-201ENST00000641974 660 ntBASIC17.76■□□□□ 0.43
USP46P62068 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.76■□□□□ 0.43
USP46P62068 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.76■□□□□ 0.43
USP46P62068 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP46P62068 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP46P62068 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP46P62068 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
USP46P62068 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms