Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO4P61968 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO4P61968 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.81□□□□□ -0.2
LMO4P61968 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.81□□□□□ -0.2
LMO4P61968 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO4P61968 AC006277.1-201ENST00000624348 1610 ntBASIC13.81□□□□□ -0.2
LMO4P61968 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LMO4P61968 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO4P61968 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO4P61968 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LMO4P61968 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO4P61968 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 AC092068.3-201ENST00000587894 2016 ntBASIC13.8□□□□□ -0.2
LMO4P61968 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO4P61968 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO4P61968 MIR943-201ENST00000401286 94 ntBASIC13.8□□□□□ -0.2
LMO4P61968 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO4P61968 AC107890.1-201ENST00000422478 521 ntBASIC13.8□□□□□ -0.2
LMO4P61968 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO4P61968 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO4P61968 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO4P61968 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO4P61968 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO4P61968 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO4P61968 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO4P61968 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO4P61968 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LMO4P61968 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO4P61968 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO4P61968 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO4P61968 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO4P61968 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO4P61968 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 AC125807.1-201ENST00000483097 614 ntBASIC13.79□□□□□ -0.2
LMO4P61968 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 AC093214.1-201ENST00000511688 1107 ntBASIC13.79□□□□□ -0.2
LMO4P61968 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.79□□□□□ -0.2
LMO4P61968 AC105233.2-201ENST00000523697 349 ntBASIC13.79□□□□□ -0.2
LMO4P61968 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 AF228730.5-201ENST00000530288 346 ntBASIC13.79□□□□□ -0.2
LMO4P61968 AC140878.1-201ENST00000565277 250 ntBASIC13.79□□□□□ -0.2
LMO4P61968 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.79□□□□□ -0.2
LMO4P61968 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO4P61968 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 AC073389.1-201ENST00000595595 795 ntBASIC13.79□□□□□ -0.2
LMO4P61968 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO4P61968 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LMO4P61968 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LMO4P61968 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms