Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCFC1P51610 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.66□□□□□ -0.06
HCFC1P51610 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCFC1P51610 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HCFC1P51610 AC073592.8-201ENST00000624126 511 ntBASIC14.66□□□□□ -0.06
HCFC1P51610 AC004840.1-201ENST00000636359 365 ntBASIC14.66□□□□□ -0.06
HCFC1P51610 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.66□□□□□ -0.06
HCFC1P51610 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HCFC1P51610 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HCFC1P51610 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCFC1P51610 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCFC1P51610 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCFC1P51610 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCFC1P51610 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.65□□□□□ -0.06
HCFC1P51610 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
HCFC1P51610 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.65□□□□□ -0.06
HCFC1P51610 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HCFC1P51610 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HCFC1P51610 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.65□□□□□ -0.06
HCFC1P51610 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HCFC1P51610 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.65□□□□□ -0.06
HCFC1P51610 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.65□□□□□ -0.06
HCFC1P51610 IGHV3-62-201ENST00000520057 340 ntBASIC14.65□□□□□ -0.06
HCFC1P51610 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.65□□□□□ -0.06
HCFC1P51610 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HCFC1P51610 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HCFC1P51610 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.64□□□□□ -0.07
HCFC1P51610 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.64□□□□□ -0.07
HCFC1P51610 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HCFC1P51610 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 AL355312.1-201ENST00000407115 2176 ntBASIC14.64□□□□□ -0.07
HCFC1P51610 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.64□□□□□ -0.07
HCFC1P51610 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 AC027369.6-201ENST00000525520 931 ntBASIC14.64□□□□□ -0.07
HCFC1P51610 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.64□□□□□ -0.07
HCFC1P51610 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.64□□□□□ -0.07
HCFC1P51610 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.64□□□□□ -0.07
HCFC1P51610 AC027307.3-201ENST00000594262 1100 ntBASIC14.64□□□□□ -0.07
HCFC1P51610 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.64□□□□□ -0.07
HCFC1P51610 IGHV3-72-202ENST00000621503 303 ntBASIC14.64□□□□□ -0.07
HCFC1P51610 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HCFC1P51610 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
HCFC1P51610 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.64□□□□□ -0.07
HCFC1P51610 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.64□□□□□ -0.07
HCFC1P51610 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HCFC1P51610 AC020916.1-201ENST00000587762 1774 ntBASIC14.64□□□□□ -0.07
HCFC1P51610 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HCFC1P51610 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.63□□□□□ -0.07
HCFC1P51610 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.63□□□□□ -0.07
HCFC1P51610 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
HCFC1P51610 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.63□□□□□ -0.07
HCFC1P51610 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms