Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF144AP50876 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF144AP50876 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF144AP50876 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF144AP50876 AC078925.2-201ENST00000624013 1973 ntBASIC15.77■□□□□ 0.12
RNF144AP50876 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF144AP50876 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF144AP50876 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 RPS2P1-201ENST00000434010 821 ntBASIC15.77■□□□□ 0.12
RNF144AP50876 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF144AP50876 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF144AP50876 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF144AP50876 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF144AP50876 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF144AP50876 AL691432.3-201ENST00000621860 400 ntBASIC15.77■□□□□ 0.12
RNF144AP50876 AL139288.1-201ENST00000623748 933 ntBASIC15.77■□□□□ 0.12
RNF144AP50876 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF144AP50876 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
RNF144AP50876 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF144AP50876 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF144AP50876 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
RNF144AP50876 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
RNF144AP50876 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF144AP50876 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF144AP50876 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RNF144AP50876 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF144AP50876 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RNF144AP50876 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.11
RNF144AP50876 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF144AP50876 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF144AP50876 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.11
RNF144AP50876 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF144AP50876 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 AL139384.1-201ENST00000612143 3047 ntBASIC15.76■□□□□ 0.11
RNF144AP50876 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF144AP50876 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF144AP50876 AL662844.4-201ENST00000606367 2838 ntBASIC15.76■□□□□ 0.11
RNF144AP50876 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF144AP50876 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RNF144AP50876 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF144AP50876 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.76■□□□□ 0.11
RNF144AP50876 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF144AP50876 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF144AP50876 RN7SL510P-201ENST00000581311 263 ntBASIC15.76■□□□□ 0.11
RNF144AP50876 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF144AP50876 AC148477.8-201ENST00000624298 468 ntBASIC15.76■□□□□ 0.11
RNF144AP50876 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF144AP50876 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 PCDHB19P-201ENST00000570871 2371 ntBASIC15.76■□□□□ 0.11
RNF144AP50876 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
RNF144AP50876 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF144AP50876 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
RNF144AP50876 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNF144AP50876 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNF144AP50876 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
RNF144AP50876 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNF144AP50876 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.75■□□□□ 0.11
RNF144AP50876 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF144AP50876 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms