Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.66■□□□□ 0.42
MTHFRP42898 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 OR8S1-201ENST00000310194 1080 ntBASIC17.66■□□□□ 0.42
MTHFRP42898 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 PIN1P1-201ENST00000412108 996 ntBASIC17.66■□□□□ 0.42
MTHFRP42898 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 SERBP1P5-201ENST00000510079 1181 ntBASIC17.66■□□□□ 0.42
MTHFRP42898 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.66■□□□□ 0.42
MTHFRP42898 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.66■□□□□ 0.42
MTHFRP42898 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.66■□□□□ 0.42
MTHFRP42898 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.66■□□□□ 0.42
MTHFRP42898 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
MTHFRP42898 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.66■□□□□ 0.42
MTHFRP42898 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
MTHFRP42898 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MTHFRP42898 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MTHFRP42898 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 MIR346-201ENST00000362234 95 ntBASIC17.65■□□□□ 0.42
MTHFRP42898 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
MTHFRP42898 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
MTHFRP42898 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 AC004890.2-204ENST00000481968 304 ntBASIC17.65■□□□□ 0.42
MTHFRP42898 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MTHFRP42898 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.65■□□□□ 0.42
MTHFRP42898 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.65■□□□□ 0.42
MTHFRP42898 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.65■□□□□ 0.42
MTHFRP42898 AL008721.1-201ENST00000609964 604 ntBASIC17.65■□□□□ 0.42
MTHFRP42898 AC025048.6-201ENST00000634326 1161 ntBASIC17.65■□□□□ 0.42
MTHFRP42898 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.65■□□□□ 0.42
MTHFRP42898 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MTHFRP42898 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MTHFRP42898 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.65■□□□□ 0.42
MTHFRP42898 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MTHFRP42898 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MTHFRP42898 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.64■□□□□ 0.42
MTHFRP42898 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MTHFRP42898 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.64■□□□□ 0.41
MTHFRP42898 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.64■□□□□ 0.41
MTHFRP42898 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.64■□□□□ 0.41
MTHFRP42898 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.64■□□□□ 0.41
MTHFRP42898 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MTHFRP42898 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MTHFRP42898 SPDYE22P-201ENST00000582158 798 ntBASIC17.64■□□□□ 0.41
MTHFRP42898 AL359881.2-201ENST00000602973 570 ntBASIC17.64■□□□□ 0.41
MTHFRP42898 AL662799.1-202ENST00000614205 422 ntBASIC17.64■□□□□ 0.41
MTHFRP42898 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MTHFRP42898 GNAS-203ENST00000306120 1878 ntBASIC17.64■□□□□ 0.41
MTHFRP42898 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MTHFRP42898 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms