Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC29.31■■■□□ 2.28
NCAPD3P42695 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
NCAPD3P42695 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
NCAPD3P42695 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
NCAPD3P42695 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
NCAPD3P42695 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
NCAPD3P42695 MPV17-206ENST00000402722 827 ntTSL 3 BASIC29.3■■■□□ 2.28
NCAPD3P42695 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC29.3■■■□□ 2.28
NCAPD3P42695 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC29.3■■■□□ 2.28
NCAPD3P42695 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC29.3■■■□□ 2.28
NCAPD3P42695 AC024267.1-201ENST00000582320 895 ntBASIC29.3■■■□□ 2.28
NCAPD3P42695 AC026979.3-201ENST00000607315 403 ntBASIC29.3■■■□□ 2.28
NCAPD3P42695 SNX33P1-201ENST00000592116 1762 ntBASIC29.3■■■□□ 2.28
NCAPD3P42695 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
NCAPD3P42695 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
NCAPD3P42695 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
NCAPD3P42695 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
NCAPD3P42695 GPAA1P2-201ENST00000417923 928 ntBASIC29.29■■■□□ 2.28
NCAPD3P42695 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 SLC25A47P1-201ENST00000531577 414 ntBASIC29.29■■■□□ 2.28
NCAPD3P42695 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC29.29■■■□□ 2.28
NCAPD3P42695 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC29.29■■■□□ 2.28
NCAPD3P42695 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
NCAPD3P42695 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC29.29■■■□□ 2.28
NCAPD3P42695 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NCAPD3P42695 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC29.28■■■□□ 2.28
NCAPD3P42695 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC29.28■■■□□ 2.28
NCAPD3P42695 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NCAPD3P42695 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
NCAPD3P42695 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
NCAPD3P42695 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
NCAPD3P42695 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
NCAPD3P42695 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NCAPD3P42695 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
NCAPD3P42695 AP000812.2-201ENST00000538934 718 ntBASIC29.28■■■□□ 2.28
NCAPD3P42695 MIR3615-201ENST00000581999 87 ntBASIC29.28■■■□□ 2.28
NCAPD3P42695 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NCAPD3P42695 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
NCAPD3P42695 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 AC116353.5-201ENST00000638148 1699 ntBASIC29.27■■■□□ 2.28
NCAPD3P42695 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
NCAPD3P42695 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
NCAPD3P42695 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC29.27■■■□□ 2.28
NCAPD3P42695 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC29.27■■■□□ 2.28
NCAPD3P42695 C2orf69P2-201ENST00000562032 1123 ntBASIC29.27■■■□□ 2.28
NCAPD3P42695 APRT-204ENST00000563655 709 ntTSL 5 BASIC29.27■■■□□ 2.28
NCAPD3P42695 DERL2-202ENST00000570848 657 ntTSL 5 BASIC29.27■■■□□ 2.28
NCAPD3P42695 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC29.27■■■□□ 2.28
NCAPD3P42695 RPS15-212ENST00000593052 629 ntTSL 2 BASIC29.27■■■□□ 2.28
NCAPD3P42695 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC29.27■■■□□ 2.28
NCAPD3P42695 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
NCAPD3P42695 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NCAPD3P42695 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
NCAPD3P42695 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
NCAPD3P42695 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
NCAPD3P42695 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.28
NCAPD3P42695 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC29.26■■■□□ 2.28
NCAPD3P42695 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC29.26■■■□□ 2.27
NCAPD3P42695 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC29.26■■■□□ 2.27
NCAPD3P42695 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 AL442647.2-201ENST00000429864 857 ntBASIC29.26■■■□□ 2.27
NCAPD3P42695 RPL7P3-201ENST00000441388 714 ntBASIC29.26■■■□□ 2.27
NCAPD3P42695 PTK7-212ENST00000476760 902 ntTSL 2 BASIC29.26■■■□□ 2.27
NCAPD3P42695 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC29.26■■■□□ 2.27
NCAPD3P42695 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC29.26■■■□□ 2.27
NCAPD3P42695 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC29.26■■■□□ 2.27
NCAPD3P42695 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NCAPD3P42695 DEK-201ENST00000244776 1441 ntTSL 2 BASIC29.26■■■□□ 2.27
NCAPD3P42695 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms