Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.88■□□□□ 0.45
CHKAP35790 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.88■□□□□ 0.45
CHKAP35790 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.88■□□□□ 0.45
CHKAP35790 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.88■□□□□ 0.45
CHKAP35790 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHKAP35790 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHKAP35790 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHKAP35790 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 AC078925.2-201ENST00000624013 1973 ntBASIC17.88■□□□□ 0.45
CHKAP35790 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.88■□□□□ 0.45
CHKAP35790 DOC2GP-204ENST00000639052 2548 ntBASIC17.88■□□□□ 0.45
CHKAP35790 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHKAP35790 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHKAP35790 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CHKAP35790 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
CHKAP35790 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHKAP35790 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 AP002414.1-201ENST00000391405 1147 ntBASIC17.87■□□□□ 0.45
CHKAP35790 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.87■□□□□ 0.45
CHKAP35790 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CHKAP35790 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 GGTLC5P-201ENST00000617623 998 ntBASIC17.87■□□□□ 0.45
CHKAP35790 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.87■□□□□ 0.45
CHKAP35790 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.87■□□□□ 0.45
CHKAP35790 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.87■□□□□ 0.45
CHKAP35790 AL135999.2-201ENST00000622438 1686 ntBASIC17.87■□□□□ 0.45
CHKAP35790 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHKAP35790 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.86■□□□□ 0.45
CHKAP35790 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.86■□□□□ 0.45
CHKAP35790 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHKAP35790 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 AC079328.2-201ENST00000561241 3354 ntBASIC17.86■□□□□ 0.45
CHKAP35790 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 KRT18P13-201ENST00000400056 1290 ntBASIC17.86■□□□□ 0.45
CHKAP35790 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 CRYGEP-201ENST00000412192 528 ntBASIC17.86■□□□□ 0.45
CHKAP35790 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.86■□□□□ 0.45
CHKAP35790 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CHKAP35790 PGAM5P1-201ENST00000518923 814 ntBASIC17.86■□□□□ 0.45
CHKAP35790 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.86■□□□□ 0.45
CHKAP35790 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.86■□□□□ 0.45
CHKAP35790 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.86■□□□□ 0.45
CHKAP35790 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.86■□□□□ 0.45
CHKAP35790 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.86■□□□□ 0.45
CHKAP35790 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.86■□□□□ 0.45
CHKAP35790 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHKAP35790 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms