Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6P35125 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.57■■□□□ 1.2
USP6P35125 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
USP6P35125 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6P35125 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6P35125 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6P35125 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6P35125 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.57■■□□□ 1.2
USP6P35125 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC22.57■■□□□ 1.2
USP6P35125 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
USP6P35125 AC098859.1-201ENST00000502915 1238 ntBASIC22.57■■□□□ 1.2
USP6P35125 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.57■■□□□ 1.2
USP6P35125 ZNF890P-202ENST00000530367 1156 ntBASIC22.57■■□□□ 1.2
USP6P35125 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.57■■□□□ 1.2
USP6P35125 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC22.57■■□□□ 1.2
USP6P35125 FHL2-212ENST00000607522 759 ntTSL 2 BASIC22.57■■□□□ 1.2
USP6P35125 AL358472.5-202ENST00000641448 1267 ntBASIC22.57■■□□□ 1.2
USP6P35125 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6P35125 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.56■■□□□ 1.2
USP6P35125 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
USP6P35125 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 AC067852.2-201ENST00000590513 2313 ntBASIC22.56■■□□□ 1.2
USP6P35125 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.56■■□□□ 1.2
USP6P35125 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6P35125 DPM2-202ENST00000373110 738 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC22.56■■□□□ 1.2
USP6P35125 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 MTND6P24-201ENST00000440466 518 ntBASIC22.56■■□□□ 1.2
USP6P35125 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.56■■□□□ 1.2
USP6P35125 RNA5SP410-201ENST00000516285 106 ntBASIC22.56■■□□□ 1.2
USP6P35125 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.56■■□□□ 1.2
USP6P35125 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 CR383656.12-201ENST00000549567 513 ntBASIC22.56■■□□□ 1.2
USP6P35125 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.56■■□□□ 1.2
USP6P35125 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6P35125 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC22.56■■□□□ 1.2
USP6P35125 AC004233.3-201ENST00000607794 1269 ntBASIC22.56■■□□□ 1.2
USP6P35125 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC22.55■■□□□ 1.2
USP6P35125 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
USP6P35125 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
USP6P35125 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 GK-202ENST00000378941 458 ntTSL 3 BASIC22.55■■□□□ 1.2
USP6P35125 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USP6P35125 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC22.55■■□□□ 1.2
USP6P35125 AL132655.2-201ENST00000596276 594 ntBASIC22.55■■□□□ 1.2
USP6P35125 AL589739.1-201ENST00000607720 493 ntBASIC22.55■■□□□ 1.2
USP6P35125 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP6P35125 AC092068.3-201ENST00000587894 2016 ntBASIC22.55■■□□□ 1.2
USP6P35125 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
USP6P35125 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
USP6P35125 PP12613-201ENST00000424958 2230 ntBASIC22.54■■□□□ 1.2
USP6P35125 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
USP6P35125 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
USP6P35125 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6P35125 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.54■■□□□ 1.2
USP6P35125 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP6P35125 NME2P1-201ENST00000426182 414 ntBASIC22.54■■□□□ 1.2
USP6P35125 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC22.54■■□□□ 1.2
USP6P35125 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
USP6P35125 NAA50-208ENST00000497255 789 ntTSL 5 BASIC22.54■■□□□ 1.2
USP6P35125 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6P35125 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6P35125 AL079307.3-201ENST00000556114 283 ntBASIC22.54■■□□□ 1.2
USP6P35125 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC22.54■■□□□ 1.2
USP6P35125 AC027307.3-201ENST00000594262 1100 ntBASIC22.54■■□□□ 1.2
USP6P35125 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
USP6P35125 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP6P35125 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP6P35125 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6P35125 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.53■■□□□ 1.2
USP6P35125 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6P35125 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
USP6P35125 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
USP6P35125 PCDHB17P-201ENST00000539533 2393 ntBASIC22.53■■□□□ 1.2
USP6P35125 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6P35125 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6P35125 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC22.53■■□□□ 1.2
USP6P35125 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms