Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A4P31645 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
SLC6A4P31645 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SLC6A4P31645 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC6A4P31645 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A4P31645 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC6A4P31645 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLC6A4P31645 AL031055.1-201ENST00000606362 631 ntBASIC17.3■□□□□ 0.36
SLC6A4P31645 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A4P31645 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLC6A4P31645 AP001350.2-201ENST00000625104 1094 ntBASIC17.3■□□□□ 0.36
SLC6A4P31645 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLC6A4P31645 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A4P31645 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 AL671710.1-201ENST00000610245 2349 ntBASIC17.3■□□□□ 0.36
SLC6A4P31645 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A4P31645 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 AL645728.1-201ENST00000366221 2101 ntBASIC17.29■□□□□ 0.36
SLC6A4P31645 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 AL355306.1-201ENST00000415580 579 ntBASIC17.29■□□□□ 0.36
SLC6A4P31645 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC6A4P31645 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC6A4P31645 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC6A4P31645 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A4P31645 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC6A4P31645 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SLC6A4P31645 AC080080.1-201ENST00000625121 2420 ntBASIC17.29■□□□□ 0.36
SLC6A4P31645 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A4P31645 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 AC005915.1-201ENST00000624912 2018 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 AC254562.1-201ENST00000417586 456 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 AC092474.2-201ENST00000424288 719 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC6A4P31645 AC092183.1-201ENST00000469884 875 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC6A4P31645 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC6A4P31645 AC013467.2-201ENST00000605472 835 ntBASIC17.28■□□□□ 0.36
SLC6A4P31645 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A4P31645 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A4P31645 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A4P31645 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms