Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC139887.3-201ENST00000568585 713 ntBASIC15.56■□□□□ 0.08
SHC1P29353 AL353135.1-201ENST00000606729 504 ntBASIC15.56■□□□□ 0.08
SHC1P29353 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.56■□□□□ 0.08
SHC1P29353 AL589182.2-201ENST00000619332 1049 ntBASIC15.56■□□□□ 0.08
SHC1P29353 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHC1P29353 NCF1C-201ENST00000438382 1427 ntBASIC15.56■□□□□ 0.08
SHC1P29353 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC1P29353 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SHC1P29353 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.56■□□□□ 0.08
SHC1P29353 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.56■□□□□ 0.08
SHC1P29353 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC1P29353 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SHC1P29353 AL162727.3-201ENST00000635661 2787 ntBASIC15.56■□□□□ 0.08
SHC1P29353 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
SHC1P29353 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC1P29353 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC1P29353 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC1P29353 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 AC006504.4-201ENST00000592118 1568 ntBASIC15.55■□□□□ 0.08
SHC1P29353 AP002414.3-201ENST00000589352 1468 ntBASIC15.55■□□□□ 0.08
SHC1P29353 AC243591.1-201ENST00000452967 1364 ntBASIC15.55■□□□□ 0.08
SHC1P29353 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SHC1P29353 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.55■□□□□ 0.08
SHC1P29353 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 ACTG1P4-201ENST00000425123 1122 ntBASIC15.55■□□□□ 0.08
SHC1P29353 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.55■□□□□ 0.08
SHC1P29353 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.55■□□□□ 0.08
SHC1P29353 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC1P29353 AL139424.1-201ENST00000607572 797 ntBASIC15.55■□□□□ 0.08
SHC1P29353 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.55■□□□□ 0.08
SHC1P29353 AC004706.3-202ENST00000621574 984 ntBASIC15.55■□□□□ 0.08
SHC1P29353 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.55■□□□□ 0.08
SHC1P29353 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHC1P29353 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC1P29353 AC005915.1-201ENST00000624912 2018 ntBASIC15.55■□□□□ 0.08
SHC1P29353 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SHC1P29353 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC1P29353 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHC1P29353 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SHC1P29353 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SHC1P29353 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.54■□□□□ 0.08
SHC1P29353 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.54■□□□□ 0.08
SHC1P29353 AC079776.4-201ENST00000511039 504 ntBASIC15.54■□□□□ 0.08
SHC1P29353 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.54■□□□□ 0.08
SHC1P29353 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 AL662844.1-201ENST00000546340 181 ntBASIC15.54■□□□□ 0.08
SHC1P29353 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 AP001005.1-201ENST00000571755 1248 ntBASIC15.54■□□□□ 0.08
SHC1P29353 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.54■□□□□ 0.08
SHC1P29353 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC1P29353 AC008735.5-201ENST00000623544 497 ntBASIC15.54■□□□□ 0.08
SHC1P29353 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHC1P29353 AC093525.9-201ENST00000624961 1746 ntBASIC15.54■□□□□ 0.08
SHC1P29353 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC1P29353 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms