Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC098859.1-201ENST00000502915 1238 ntBASIC13.98□□□□□ -0.17
APCP25054 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.98□□□□□ -0.17
APCP25054 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.98□□□□□ -0.17
APCP25054 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APCP25054 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APCP25054 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APCP25054 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APCP25054 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APCP25054 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APCP25054 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.98□□□□□ -0.17
APCP25054 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
APCP25054 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.98□□□□□ -0.17
APCP25054 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.97□□□□□ -0.17
APCP25054 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 AC253536.4-201ENST00000440539 267 ntBASIC13.97□□□□□ -0.17
APCP25054 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.97□□□□□ -0.17
APCP25054 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.97□□□□□ -0.17
APCP25054 AC079328.1-201ENST00000560358 952 ntBASIC13.97□□□□□ -0.17
APCP25054 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.97□□□□□ -0.17
APCP25054 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.97□□□□□ -0.17
APCP25054 AL139327.4-201ENST00000612362 153 ntBASIC13.97□□□□□ -0.17
APCP25054 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.97□□□□□ -0.17
APCP25054 AP001350.2-201ENST00000625104 1094 ntBASIC13.97□□□□□ -0.17
APCP25054 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.97□□□□□ -0.17
APCP25054 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.97□□□□□ -0.17
APCP25054 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.97□□□□□ -0.17
APCP25054 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APCP25054 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 WIZP1-201ENST00000531444 2299 ntBASIC13.97□□□□□ -0.17
APCP25054 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 BTBD6P1-201ENST00000412176 1267 ntBASIC13.97□□□□□ -0.17
APCP25054 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.97□□□□□ -0.17
APCP25054 MIR5189-201ENST00000577370 114 ntBASIC13.97□□□□□ -0.17
APCP25054 AC025048.3-201ENST00000590609 569 ntBASIC13.97□□□□□ -0.17
APCP25054 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APCP25054 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.97□□□□□ -0.17
APCP25054 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 LINC00304-203ENST00000565008 1864 ntBASIC13.97□□□□□ -0.17
APCP25054 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.97□□□□□ -0.17
APCP25054 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APCP25054 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.96□□□□□ -0.17
APCP25054 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.96□□□□□ -0.17
APCP25054 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APCP25054 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 AC021097.1-201ENST00000607902 574 ntBASIC13.96□□□□□ -0.17
APCP25054 AC004461.2-201ENST00000629517 803 ntBASIC13.96□□□□□ -0.17
APCP25054 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
APCP25054 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
APCP25054 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
APCP25054 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
APCP25054 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.96□□□□□ -0.17
APCP25054 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.96□□□□□ -0.17
APCP25054 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 DUX4L45-201ENST00000566406 1057 ntBASIC13.96□□□□□ -0.17
APCP25054 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 AL391069.4-201ENST00000609583 481 ntBASIC13.96□□□□□ -0.17
APCP25054 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.96□□□□□ -0.17
APCP25054 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APCP25054 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.96□□□□□ -0.17
APCP25054 AC092978.1-202ENST00000637590 1327 ntBASIC13.96□□□□□ -0.17
APCP25054 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.96□□□□□ -0.18
APCP25054 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
APCP25054 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APCP25054 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
APCP25054 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.96□□□□□ -0.18
APCP25054 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.96□□□□□ -0.18
APCP25054 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms