Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
XRCC1P18887 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 AL603756.1-201ENST00000606511 2163 ntBASIC16.92■□□□□ 0.3
XRCC1P18887 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 UNC93B6-202ENST00000528242 690 ntBASIC16.92■□□□□ 0.3
XRCC1P18887 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 Z83851.2-201ENST00000609564 659 ntBASIC16.92■□□□□ 0.3
XRCC1P18887 AL139327.4-201ENST00000612362 153 ntBASIC16.92■□□□□ 0.3
XRCC1P18887 AC005593.1-201ENST00000624894 515 ntBASIC16.92■□□□□ 0.3
XRCC1P18887 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 AC104109.2-201ENST00000602919 1418 ntBASIC16.92■□□□□ 0.3
XRCC1P18887 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC1P18887 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC1P18887 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
XRCC1P18887 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
XRCC1P18887 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC1P18887 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.91■□□□□ 0.3
XRCC1P18887 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
XRCC1P18887 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
XRCC1P18887 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC1P18887 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.91■□□□□ 0.3
XRCC1P18887 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.91■□□□□ 0.3
XRCC1P18887 AC034105.1-201ENST00000563488 319 ntBASIC16.91■□□□□ 0.3
XRCC1P18887 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
XRCC1P18887 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
XRCC1P18887 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
XRCC1P18887 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.91■□□□□ 0.3
XRCC1P18887 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC1P18887 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC1P18887 PCDHA1-201ENST00000378133 2726 ntBASIC16.9■□□□□ 0.3
XRCC1P18887 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.9■□□□□ 0.3
XRCC1P18887 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 AC006504.4-201ENST00000592118 1568 ntBASIC16.9■□□□□ 0.3
XRCC1P18887 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC1P18887 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.9■□□□□ 0.3
XRCC1P18887 LINC00982-205ENST00000420957 435 ntBASIC16.9■□□□□ 0.3
XRCC1P18887 ACTG1P4-201ENST00000425123 1122 ntBASIC16.9■□□□□ 0.3
XRCC1P18887 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.9■□□□□ 0.3
XRCC1P18887 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms