Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BMP3P12645 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BMP3P12645 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP3P12645 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP3P12645 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
BMP3P12645 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.43■□□□□ 0.7
BMP3P12645 KRT8P23-201ENST00000560090 1207 ntBASIC19.43■□□□□ 0.7
BMP3P12645 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.43■□□□□ 0.7
BMP3P12645 AC021097.1-201ENST00000607902 574 ntBASIC19.43■□□□□ 0.7
BMP3P12645 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP3P12645 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BMP3P12645 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP3P12645 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP3P12645 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
BMP3P12645 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 UXT-AS1-201ENST00000590504 1525 ntBASIC19.42■□□□□ 0.7
BMP3P12645 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.42■□□□□ 0.7
BMP3P12645 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.42■□□□□ 0.7
BMP3P12645 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 LINC00895-201ENST00000629028 1637 ntBASIC19.42■□□□□ 0.7
BMP3P12645 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 AC026471.1-201ENST00000564629 3026 ntBASIC19.42■□□□□ 0.7
BMP3P12645 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.42■□□□□ 0.7
BMP3P12645 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.42■□□□□ 0.7
BMP3P12645 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP3P12645 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.42■□□□□ 0.7
BMP3P12645 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
BMP3P12645 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 AC006277.1-201ENST00000624348 1610 ntBASIC19.41■□□□□ 0.7
BMP3P12645 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.41■□□□□ 0.7
BMP3P12645 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.41■□□□□ 0.7
BMP3P12645 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.41■□□□□ 0.7
BMP3P12645 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.41■□□□□ 0.7
BMP3P12645 GPS2P2-201ENST00000430745 888 ntBASIC19.41■□□□□ 0.7
BMP3P12645 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.41■□□□□ 0.7
BMP3P12645 AC013467.2-201ENST00000605472 835 ntBASIC19.41■□□□□ 0.7
BMP3P12645 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.41■□□□□ 0.7
BMP3P12645 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BMP3P12645 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BMP3P12645 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.41■□□□□ 0.7
BMP3P12645 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.41■□□□□ 0.7
BMP3P12645 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BMP3P12645 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
BMP3P12645 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP3P12645 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BMP3P12645 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BMP3P12645 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms