Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40ALP0C0E4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AL139400.1-201ENST00000366220 510 ntBASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AC023141.5-201ENST00000458585 616 ntBASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AC004449.1-201ENST00000564240 433 ntBASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AC099522.2-201ENST00000607001 744 ntBASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 AL161645.1-201ENST00000622716 1255 ntBASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40ALP0C0E4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 RN7SL589P-201ENST00000481268 310 ntBASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 AC025678.2-201ENST00000562061 970 ntBASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB40ALP0C0E4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AL353732.1-201ENST00000569618 1459 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC124067.4-201ENST00000519691 2379 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC012569.1-201ENST00000591191 1524 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms